Early Gnathostome Phylogeny Revisited: Multiple Method Consensus

doi:10.1371/journal.pone.0163157

IVPP-IR > 中科院古脊椎所（2000年以后）

	Early Gnathostome Phylogeny Revisited: Multiple Method Consensus
	Qiao, Tuo 1; King, Benedict 2; Long, John A.2; Ahlberg, Per E.3; Zhu, Min 1
	2016-09-20
发表期刊	PLOS ONE
卷号	11 期号:9
文章类型	Article
摘要	A series of recent studies recovered consistent phylogenetic scenarios of jawed vertebrates, such as the paraphyly of placoderms with respect to crown gnathostomes, and antiarchs as the sister group of all other jawed vertebrates. However, some of the phylogenetic relationships within the group have remained controversial, such as the positions of Entelognathus, ptyctodontids, and the Guiyu-lineage that comprises Guiyu, Psarolepis and Achoania. The revision of the dataset in a recent study reveals a modified phylogenetic hypothesis, which shows that some of these phylogenetic conflicts were sourced from a few inadvertent miscodings. The interrelationships of early gnathostomes are addressed based on a combined new dataset with 103 taxa and 335 characters, which is the most comprehensive morphological dataset constructed to date. This dataset is investigated in a phylogenetic context using maximum parsimony (MP), Bayesian inference (BI) and maximum likelihood (ML) approaches in an attempt to explore the consensus and incongruence between the hypotheses of early gnathostome interrelationships recovered from different methods. Our findings consistently corroborate the paraphyly of placoderms, all 'acanthodians' as a paraphyletic stem group of chondrichthyans, Entelognathus as a stem gnathostome, and the Guiyu-lineage as stem sarcopterygians. The incongruence using different methods is less significant than the consensus, and mainly relates to the positions of the placoderm Wuttagoonaspis, the stem chondrichthyan Ramirosuarezia, and the stem osteichthyan Lophosteus D the taxa that are either poorly known or highly specialized in character complement. Given that the different performances of each phylogenetic approach, our study provides an empirical case that the multiple phylogenetic analyses of morphological data are mutually complementary rather than redundant.
WOS标题词	Science & Technology
DOI	10.1371/journal.pone.0163157
关键词[WOS]	LOPHOSTEUS-SUPERBUS PANDER ; NEW-SOUTH-WALES ; BAYESIAN-INFERENCE ; MAXIMUM-LIKELIHOOD ; WESTERN-AUSTRALIA ; PLACODERM FISHES ; COMMON ANCESTOR ; DEVONIAN PERIOD ; SHEDS LIGHT ; BONY FISHES
收录类别	SCI
语种	英语
项目资助者	MST of China(2012CB821902) ; National Natural Science Foundation of China(41202016 ; National Science Fund for Talent Training in Basic Science(J1210008) ; State Key Laboratory of Palaeobiology and Straigraphy (Nanjing Institute of Geology and Palaeontology, CAS)(133109) ; Australian Research Council(DP14014161) ; 41472016 ; 41530102)
WOS研究方向	Science & Technology - Other Topics
WOS类目	Multidisciplinary Sciences
WOS记录号	WOS:000383892100059
引用统计
文献类型	期刊论文
条目标识符	http://119.78.100.205/handle/311034/6989
专题	中科院古脊椎所（2000年以后）
作者单位	1.Chinese Acad Sci, Inst Vertebrate Paleontol & Paleoanthropol, Key Lab Vertebrate Evolut & Human Origins, Beijing, Peoples R China 2.Flinders Univ S Australia, Sch Biol Sci, Adelaide, SA, Australia 3.Uppsala Univ, Dept Organismal Biol, Evolutionary Biol Ctr, Uppsala, Sweden
推荐引用方式 GB/T 7714	Qiao, Tuo,King, Benedict,Long, John A.,et al. Early Gnathostome Phylogeny Revisited: Multiple Method Consensus[J]. PLOS ONE,2016,11(9).
APA	Qiao, Tuo,King, Benedict,Long, John A.,Ahlberg, Per E.,&Zhu, Min.(2016).Early Gnathostome Phylogeny Revisited: Multiple Method Consensus.PLOS ONE,11(9).
MLA	Qiao, Tuo,et al."Early Gnathostome Phylogeny Revisited: Multiple Method Consensus".PLOS ONE 11.9(2016).

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